SMOC2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMOC2 protein abundance is significantly associated with the RNA expression of many other genes, with 15,107 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SMOC2-associated genes across cancer lineages are ISLR, SFRP4, and AEBP1. Each is linked with SMOC2 in more than 8 cancer types. Because this analysis shows association rather than direction, both SMOC2-to-partner and partner-to-SMOC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMOC2 versus ISLR in CCRCC, with a Pearson correlation of 0.72.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMOC2→partner) and Y-score (partner→SMOC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCISLR →+1.736+1.140<.001<.00139
COADSFRP4 →+2.480+0.832.001<.00129
OVAEBP1 →+1.766+0.683<.001<.00138
OVACTA2 →+1.739+0.854<.001<.00138
OVGLT8D2 →+1.227+0.659<.001.00238
BRCAMATN3 →+1.599+0.724<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,107 associations by consensus.

SMOC2 vs ISLR — CCRCC

Per-sample scatter of SMOC2 vs ISLR in CCRCC (Pearson r = 0.72).

Explore this scatter interactively →

Exploration