SMIM5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMIM5 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMIM5-associated genes across cancer lineages are MIR514B, USP9YP15, and RNA5SP508. Each is linked with SMIM5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM5-to-partner and partner-to-SMIM5 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM5→partner) and Y-score (partner→SMIM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMIR514B →+0.363+8.471<.001.00531
BRCAUSP9YP15 →+0.084+8.471<.001.00531
UCECRNA5SP508 →+0.637+5.694<.001.00331
UCECRNU7-20P →+1.484+5.358<.001.00631
UCECIGHVIII-2-1 →+0.151+6.027<.001.00231
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

Exploration