SMIM5

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SMIM5 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,937 significant associations in total. PANCREAS shows the largest number of these associations.

The most reproducible SMIM5-associated GO terms across cancer lineages are Cilium movement involved in cell motility, Cilium or flagellum-dependent cell motility, and Cilium-dependent cell motility. Each is linked with SMIM5 in more than 12 cancer types. Because this analysis shows association rather than direction, both SMIM5-to-partner and partner-to-SMIM5 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM5→partner) and Y-score (partner→SMIM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYCilium movement involved in cell motility →-0.071-0.403.001.002313
KIDNEYCilium or flagellum-dependent cell motility →-0.062-0.380.003.005312
KIDNEYCilium-dependent cell motility →-0.062-0.380.003.005312
UPPER_AERODIGESTIVE_TRACTCilium movement →-0.069-0.577.002.008113
STOMACHMaintenance of unfolded protein →+0.136+1.317<.001<.001310
STOMACHEstablishment or maintenance of epithelial cell apical/basal polarity →+0.111+0.958<.001.003310
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,937 associations by consensus.

Exploration