SMIM33

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SMIM33 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,730 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SMIM33-associated GO terms across cancer lineages are Reticulophagy, Humoral immune response, and Activation of GTPase activity. Each is linked with SMIM33 in more than 4 cancer types. Because this analysis shows association rather than direction, both SMIM33-to-partner and partner-to-SMIM33 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Reticulophagy grouped by SMIM33-low versus SMIM33-high in KIDNEY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM33→partner) and Y-score (partner→SMIM33) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYReticulophagy →+0.048+0.014.003.00935
SOFT_TISSUEHumoral immune response →-0.099-0.002.003.00334
SOFT_TISSUEActivation of GTPase activity →+0.056+0.003.004.00834
SOFT_TISSUENeurotransmitter loading into synaptic vesicle →-0.855-0.003.006.00834
BREASTNegative regulation of CD8-positive, alpha-beta T cell differentiation →+0.141+0.067.002.00634
BLOOD_LymphomaNeurotransmitter receptor diffusion trapping →-0.782-0.016.002.00634
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,730 associations by consensus.

Reticulophagy by SMIM33 expression — KIDNEY

Box plot of Reticulophagy in SMIM33-low vs SMIM33-high samples in KIDNEY.

Explore this box plot interactively →

Exploration