Across TCGA patient cohorts, SMIM29 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,323 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SMIM29-associated proteins across cancer lineages are LEMD2, HIP1, and MAP1A. Each is linked with SMIM29 in more than 5 cancer types. Because this analysis shows association rather than direction, both SMIM29-to-partner and partner-to-SMIM29 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM29→partner) and Y-score (partner→SMIM29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	LEMD2 →	+0.276	+0.243	<.001	<.001	3	6
LUAD	HIP1 →	+0.371	+0.639	<.001	<.001	3	5
LSCC	MAP1A →	+0.433	+0.437	.003	<.001	3	4
COAD	PLS3 →	+0.505	+0.563	<.001	<.001	3	4
LUAD	SPATS2 →	-0.293	-0.519	.006	<.001	3	4
LSCC	SPCS3 →	-0.504	-0.489	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,323 associations by consensus.

Exploration

SMIM29 survival (RNA) · tumor vs normal (RNA) · all SMIM29 data types