Across TCGA patient cohorts, SMIM29 mutation is significantly associated with the RNA expression of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMIM29-associated genes across cancer lineages are RNA5SP517, RNA5SP262, and MIR3675. Each is linked with SMIM29 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM29-to-partner and partner-to-SMIM29 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM29→partner) and Y-score (partner→SMIM29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	RNA5SP517 →	+0.238	+7.640	<.001	.009	3	2
BRCA	RNA5SP262 →	+0.314	+8.055	.001	.007	3	1
BRCA	MIR3675 →	+0.418	+8.471	<.001	.005	3	1
UCEC	RNVU1-28 →	+1.178	+3.442	<.001	.001	3	1
BRCA	RNA5SP374 →	+0.322	+8.055	<.001	.007	3	1
BRCA	MIR1237 →	+0.377	+7.731	<.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

Exploration

SMIM29 survival (RNA) · tumor vs normal (RNA) · all SMIM29 data types