SMIM19

Across TCGA patient cohorts, SMIM19 RNA expression is significantly associated with the RNA expression of many other genes, with 18,143 significant associations in total. ACC shows the largest number of these associations.

The most reproducible SMIM19-associated genes across cancer lineages are LSM1, VDAC3, and GOLGA7. Each is linked with SMIM19 in more than 30 cancer types. Because this analysis shows association rather than direction, both SMIM19-to-partner and partner-to-SMIM19 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMIM19 versus LSM1 in ACC, with a Pearson correlation of 0.75.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM19→partner) and Y-score (partner→SMIM19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ACC	LSM1 →	+1.197	+0.927	<.001	<.001	3	31
ACC	VDAC3 →	+1.038	+0.994	<.001	<.001	3	31
ACC	GOLGA7 →	+1.163	+1.059	<.001	<.001	3	30
UVM	FNTA →	+1.019	+0.763	<.001	<.001	3	30
UVM	KRCC1 →	+1.098	+0.663	<.001	<.001	3	30
ACC	PIGP →	+0.835	+0.837	<.001	<.001	3	29

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,143 associations by consensus.

SMIM19 vs LSM1 — ACC

Explore this scatter interactively →