SMIM15

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMIM15 mutation is significantly associated with the total protein of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMIM15-associated genes across cancer lineages are GATA6, JNK_pT183_Y185, and Notch1. Each is linked with SMIM15 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM15-to-partner and partner-to-SMIM15 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM15→partner) and Y-score (partner→SMIM15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGATA6 →-0.211-2.314.006.03531
UCECJNK_pT183_Y185 →-0.202-3.169.013.01831
UCECNotch1 →+0.169+3.013.012.01831
UCECPKC-delta_pS664 →-0.129-2.990.026.03631
UCECTuberin →+0.371+3.169.004.01831
UCECCaspase-7-cleavedD198 →+0.875+3.019.002.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

Exploration