SMIM13

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, SMIM13 mass-spec protein is linked to patient survival in 5 of 34 cancer types, making it a survival-associated SMIM13 data layer compared with 25 for mass-spec protein and 1 for mutation status.

The strongest signal is observed in pancreatic ductal adenocarcinoma (PDAC), where higher SMIM13 mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated SMIM13 expression acts as an unfavorable survival marker, although some lineages such as PDAC and HNSC show a favorable association.

PDAC, HNSC, and LUAD are the cancer types where SMIM13 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
PDACOSQuartileAll0.8480.305.0308view →
HNSCDFSTertileAll0.8520.622.0238view →
LUADDFSQuartileAll0.8301.000.0067view →
GBMOSMedianAll0.2240.530.0104view →
LSCCDFSMedianII,III,IV0.3020.831.0384view →
Pink = unfavorable, green = favorable. Showing the 5 strongest of 5 lineages.

Exploration