SMIM13

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMIM13 mutation is significantly associated with the RNA expression of many other genes, with 485 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SMIM13-associated genes across cancer lineages are DHX37, THRSP, and SLC25A4. Each is linked with SMIM13 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM13-to-partner and partner-to-SMIM13 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM13→partner) and Y-score (partner→SMIM13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDHX37 →+0.585+3.223<.001.00931
UCECTHRSP →+1.228+3.191<.001.00931
UCECSLC25A4 →+0.645+3.346.002.00531
UCECGUF1 →+0.684+3.364<.001.00431
UCECBAG3 →+0.673+3.584.004.00331
UCECGPATCH11 →+0.623+3.502<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 485 associations by consensus.

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