SMG1P4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMG1P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,969 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SMG1P4-associated GO terms across cancer lineages are Regulation of organelle assembly, Positive regulation of telomere maintenance, and Positive regulation of post-translational protein modification. Each is linked with SMG1P4 in more than 21 cancer types. Because this analysis shows association rather than direction, both SMG1P4-to-partner and partner-to-SMG1P4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMG1P4→partner) and Y-score (partner→SMG1P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCARegulation of organelle assembly →+0.062+0.246.003<.001322
STADPositive regulation of telomere maintenance →+0.065+0.125<.001<.001322
STADPositive regulation of post-translational protein modification →+0.061+0.141<.001<.001321
ESCARegulation of cilium assembly →+0.054+0.256.001<.001321
ESCAPositive regulation of protein modification by small protein conjugation or removal →+0.063+0.234<.001<.001321
ESCAPositive regulation of telomere maintenance via telomere lengthening →+0.077+0.262<.001<.001321
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,969 associations by consensus.

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