SMG1P2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMG1P2 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,564 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SMG1P2-associated proteins across cancer lineages are RAB1A, NRF1, and PRPF31. Each is linked with SMG1P2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SMG1P2-to-partner and partner-to-SMG1P2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMG1P2→partner) and Y-score (partner→SMG1P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACRAB1A →-0.201-0.188<.001.00433
PDACNRF1 →+0.363+0.220.003.00933
PDACPRPF31 →+0.220+0.326.002<.00133
LSCCRBM15 →+0.192+0.440<.001<.00133
LSCCRNASEH2B →+0.358+0.442.001<.00133
LSCCRNF5 →+0.335+0.280<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,564 associations by consensus.

Exploration