SMDT1

Across TCGA patient cohorts, SMDT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,395 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SMDT1-associated proteins across cancer lineages are ST13, DOK3, and DDAH1. Each is linked with SMDT1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SMDT1-to-partner and partner-to-SMDT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMDT1 versus ST13 in PDAC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMDT1→partner) and Y-score (partner→SMDT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	ST13 →	+0.384	+0.389	<.001	<.001	3	6
GBM	DOK3 →	-0.699	-0.456	<.001	<.001	3	6
BRCA	DDAH1 →	+0.584	+0.505	<.001	<.001	3	6
HNSC	EPSTI1_S65 →	-0.617	-0.504	<.001	<.001	3	6
BRCA	COLGALT1 →	-0.459	-0.644	<.001	<.001	3	6
GBM	GFPT2 →	-0.982	-0.502	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,395 associations by consensus.

SMDT1 vs ST13 — PDAC

Explore this scatter interactively →