SMARCD1

Across TCGA patient cohorts, SMARCD1 protein abundance is significantly associated with the RNA expression of many other genes, with 16,542 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SMARCD1-associated genes across cancer lineages are LRRC75A, TUBB2B, and NCAPD2. Each is linked with SMARCD1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SMARCD1-to-partner and partner-to-SMARCD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMARCD1 versus LRRC75A in LSCC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCD1→partner) and Y-score (partner→SMARCD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	LRRC75A →	+0.538	+0.224	<.001	<.001	3	6
LSCC	TUBB2B →	+1.588	+0.315	<.001	<.001	3	6
HNSC	NCAPD2 →	+0.898	+0.247	.002	.001	3	6
BRCA	CDCA3 →	+0.802	+0.150	<.001	<.001	3	6
LSCC	STMN1 →	+0.925	+0.342	<.001	<.001	3	6
GBM	NCAPH →	+0.967	+0.403	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,542 associations by consensus.

SMARCD1 vs LRRC75A — LSCC

Explore this scatter interactively →