SMARCC1

Across TCGA patient cohorts, SMARCC1 RNA expression is significantly associated with the RNA expression of many other genes, with 20,542 significant associations in total. ACC shows the largest number of these associations.

The most reproducible SMARCC1-associated genes across cancer lineages are ZNF654, CKAP5, and ATAD5. Each is linked with SMARCC1 in more than 33 cancer types. Because this analysis shows association rather than direction, both SMARCC1-to-partner and partner-to-SMARCC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMARCC1 versus ZNF654 in KIRP, with a Pearson correlation of 0.85.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCC1→partner) and Y-score (partner→SMARCC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	ZNF654 →	+0.995	+1.056	<.001	<.001	3	34
SCLC	CKAP5 →	+1.344	+0.526	<.001	<.001	3	34
DLBC	ATAD5 →	+1.217	+1.478	<.001	<.001	3	34
THYM	NR2C2 →	+1.555	+0.724	<.001	<.001	3	34
DLBC	ZNF518A →	+1.610	+1.020	<.001	<.001	3	34
UVM	SUZ12 →	+1.223	+0.829	<.001	<.001	3	34

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,542 associations by consensus.

SMARCC1 vs ZNF654 — KIRP

Explore this scatter interactively →