SMARCB1

Across TCGA cell cohorts, SMARCB1 RNA expression is significantly associated with the RNA expression of many other genes, with 12,710 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SMARCB1-associated genes across cancer lineages are SPECC1L, EWSR1, and SNRPD3. Each is linked with SMARCB1 in more than 16 cancer types. Because this analysis shows association rather than direction, both SMARCB1-to-partner and partner-to-SMARCB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMARCB1 versus SPECC1L in KIDNEY, with a Pearson correlation of 0.74.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCB1→partner) and Y-score (partner→SMARCB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIDNEY	SPECC1L →	+1.014	+0.971	<.001	<.001	3	17
BREAST	EWSR1 →	+0.993	+1.387	<.001	<.001	3	17
BREAST	SNRPD3 →	+0.938	+1.169	<.001	<.001	3	16
OESOPHAGUS	MAPK1 →	+1.420	+1.221	<.001	.004	3	16
LIVER	HIRA →	+1.523	+1.253	<.001	.002	2	17
SOFT_TISSUE	CABIN1 →	+1.689	+2.936	<.001	.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,710 associations by consensus.

SMARCB1 vs SPECC1L — KIDNEY

Explore this scatter interactively →