SMARCAD1

Across TCGA cell cohorts, SMARCAD1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,771 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SMARCAD1-associated GO terms across cancer lineages are Protein localization to non-motile cilium, RNA 3'-end processing, and Centriole-centriole cohesion. Each is linked with SMARCAD1 in more than 15 cancer types. Because this analysis shows association rather than direction, both SMARCAD1-to-partner and partner-to-SMARCAD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein localization to non-motile cilium grouped by SMARCAD1-low versus SMARCAD1-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCAD1→partner) and Y-score (partner→SMARCAD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Protein localization to non-motile cilium →	+0.070	+0.644	.001	.007	3	16
BONE	RNA 3'-end processing →	+0.090	+0.826	.002	.004	3	16
LUNG_SCLC	Centriole-centriole cohesion →	+0.120	+1.148	<.001	<.001	3	15
STOMACH	Positive regulation of organelle assembly →	+0.062	+0.849	.002	<.001	3	15
LUNG_SCLC	Centrosome cycle →	+0.103	+1.132	<.001	<.001	3	15
SOFT_TISSUE	Nuclear pore organization →	+0.143	+0.663	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,771 associations by consensus.

Protein localization to non-motile cilium by SMARCAD1 expression — STOMACH

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