SMARCA1

Across TCGA patient cohorts, SMARCA1 RNA expression is significantly associated with the RNA expression of many other genes, with 20,163 significant associations in total. ACC shows the largest number of these associations.

The most reproducible SMARCA1-associated genes across cancer lineages are TTC8, STAG1, and ZBTB33. Each is linked with SMARCA1 in more than 33 cancer types. Because this analysis shows association rather than direction, both SMARCA1-to-partner and partner-to-SMARCA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMARCA1 versus TTC8 in UVM, with a Pearson correlation of 0.77.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCA1→partner) and Y-score (partner→SMARCA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	TTC8 →	+1.298	+1.191	<.001	<.001	3	34
DLBC	STAG1 →	+1.813	+0.844	<.001	<.001	3	33
ACC	ZBTB33 →	+1.190	+1.559	<.001	<.001	3	33
THYM	CAMSAP2 →	+1.515	+1.589	<.001	<.001	3	33
DLBC	SEC31A →	+1.697	+1.097	<.001	<.001	3	33
UVM	TOGARAM1 →	+1.247	+1.319	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,163 associations by consensus.

SMARCA1 vs TTC8 — UVM

Explore this scatter interactively →