SMAP1

Across TCGA cell cohorts, SMAP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,589 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SMAP1-associated GO terms across cancer lineages are Post-Golgi vesicle-mediated transport, 7-methylguanosine mRNA capping, and 7-methylguanosine RNA capping. Each is linked with SMAP1 in more than 12 cancer types. Because this analysis shows association rather than direction, both SMAP1-to-partner and partner-to-SMAP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Post-Golgi vesicle-mediated transport grouped by SMAP1-low versus SMAP1-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMAP1→partner) and Y-score (partner→SMAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Post-Golgi vesicle-mediated transport →	+0.079	+1.042	<.001	<.001	3	13
CNS	7-methylguanosine mRNA capping →	+0.106	+0.686	<.001	<.001	3	11
CNS	7-methylguanosine RNA capping →	+0.106	+0.686	<.001	<.001	3	11
LUNG_SCLC	Golgi vesicle transport →	+0.041	+0.438	.001	<.001	3	10
SKIN	1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process →	+0.110	+0.534	<.001	<.001	3	9
BLOOD_Myeloma	Piecemeal microautophagy of the nucleus →	+0.088	+0.548	<.001	.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,589 associations by consensus.

Post-Golgi vesicle-mediated transport by SMAP1 expression — STOMACH

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