SMAGP

Across TCGA cell cohorts, SMAGP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,795 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SMAGP-associated GO terms across cancer lineages are Regulation of action potential, Regulation of ventricular cardiac muscle cell action potential, and Intestinal absorption. Each is linked with SMAGP in more than 9 cancer types. Because this analysis shows association rather than direction, both SMAGP-to-partner and partner-to-SMAGP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of action potential grouped by SMAGP-low versus SMAGP-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMAGP→partner) and Y-score (partner→SMAGP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Regulation of action potential →	+0.124	+1.492	<.001	<.001	3	10
LUNG_SCLC	Regulation of ventricular cardiac muscle cell action potential →	+0.157	+1.011	<.001	.005	3	10
PANCREAS	Intestinal absorption →	+0.141	+1.261	.003	.004	3	10
BONE	Epithelial cell-cell adhesion →	+0.222	+1.476	.002	.001	3	9
OESOPHAGUS	Vestibulocochlear nerve formation →	+1.706	+1.948	<.001	<.001	3	9
STOMACH	Negative regulation of actin filament polymerization →	+0.194	+2.421	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,795 associations by consensus.

Regulation of action potential by SMAGP expression — STOMACH

Explore this box plot interactively →