Across TCGA patient cohorts, SLITRK6 protein abundance is significantly associated with the RNA expression of many other genes, with 2,699 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SLITRK6-associated genes across cancer lineages are NDRG1, RAD51AP1, and IL1A. Each is linked with SLITRK6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLITRK6-to-partner and partner-to-SLITRK6 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLITRK6→partner) and Y-score (partner→SLITRK6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	NDRG1 →	+1.213	+0.718	.001	.003	3	2
HNSC	RAD51AP1 →	-0.776	-0.419	<.001	.003	3	2
HNSC	IL1A →	+2.297	+0.521	<.001	.001	3	2
BRCA	FHL2 →	+0.910	+0.606	<.001	.002	3	2
LSCC	SLC35D1 →	+0.514	+1.184	.002	<.001	3	2
LSCC	CARD6 →	+0.925	+1.144	.003	.004	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,699 associations by consensus.

Exploration

SLITRK6 survival (RNA) · tumor vs normal (RNA) · all SLITRK6 data types