SLFN13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLFN13 protein abundance is significantly associated with the RNA expression of many other genes, with 2,450 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLFN13-associated genes across cancer lineages are PIGW, EIF3L, and ZNF436. Each is linked with SLFN13 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLFN13-to-partner and partner-to-SLFN13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLFN13 versus PIGW in LSCC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLFN13→partner) and Y-score (partner→SLFN13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPIGW →+0.506+0.513.005.00333
PDACEIF3L →-0.348-0.296.004.00432
UCECZNF436 →-0.645-0.756.001.00532
UCECFUCA1 →-1.187-1.029.001<.00132
PDACC9orf163 →+0.420+0.229.009.00232
UCECHRH2 →+0.828+0.906.003.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,450 associations by consensus.

SLFN13 vs PIGW — LSCC

Per-sample scatter of SLFN13 vs PIGW in LSCC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration