SLC9A2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC9A2 mutation is significantly associated with the RNA expression of many other genes, with 4,351 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC9A2-associated genes across cancer lineages are PPP4C, MED8, and SSU72. Each is linked with SLC9A2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC9A2-to-partner and partner-to-SLC9A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PPP4C grouped by SLC9A2-low versus SLC9A2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC9A2→partner) and Y-score (partner→SLC9A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPPP4C →+0.286+2.101.006<.00133
UCECMED8 →+0.298+2.101.001<.00133
SKCMSSU72 →+0.294+2.084<.001<.00133
UCECBOLA3 →+0.383+2.502<.001.00133
UCECRNF25 →+0.273+2.526.002.00133
UCECCDK5 →+0.461+2.400<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,351 associations by consensus.

PPP4C by SLC9A2 expression — UCEC

Box plot of PPP4C in SLC9A2-low vs SLC9A2-high samples in UCEC.

Explore this box plot interactively →

Exploration