SLC7A7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC7A7 mutation is significantly associated with the RNA expression of many other genes, with 2,132 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC7A7-associated genes across cancer lineages are RN7SL214P, MRPL20, and RN7SL402P. Each is linked with SLC7A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC7A7-to-partner and partner-to-SLC7A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL214P grouped by SLC7A7-low versus SLC7A7-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC7A7→partner) and Y-score (partner→SLC7A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRN7SL214P →+0.055+3.325<.001.00432
SKCMMRPL20 →+0.428+3.331.002.00532
SKCMRN7SL402P →+0.120+2.480<.001.00532
UCECMEX3D →+0.673+2.928<.001<.00132
UCECGAS2L1 →+0.481+1.847.001.00932
UCECKIF18B →+0.744+1.869<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,132 associations by consensus.

RN7SL214P by SLC7A7 expression — SKCM

Box plot of RN7SL214P in SLC7A7-low vs SLC7A7-high samples in SKCM.

Explore this box plot interactively →

Exploration