SLC7A7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC7A7 mutation is significantly associated with the RNA expression of many other genes, with 37 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC7A7-associated genes across cancer lineages are OOSP2, OR10J1, and GGTLC2. Each is linked with SLC7A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC7A7-to-partner and partner-to-SLC7A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OOSP2 grouped by SLC7A7-low versus SLC7A7-high in BREAST.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC7A7→partner) and Y-score (partner→SLC7A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTOOSP2 →+0.017+4.781<.001.00331
BREASTOR10J1 →+0.425+4.781<.001.00331
SKINGGTLC2 →+0.022+4.688.007<.00131
SKINCCL21 →+0.060+4.054.004.00431
SKINVSIG4 →+0.017+4.347<.001.00131
SKINKRTAP5-5 →+0.014+4.437<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 37 associations by consensus.

OOSP2 by SLC7A7 expression — BREAST

Box plot of OOSP2 in SLC7A7-low vs SLC7A7-high samples in BREAST.

Explore this box plot interactively →

Exploration