SLC7A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC7A1 protein abundance is significantly associated with the RNA expression of many other genes, with 16,284 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC7A1-associated genes across cancer lineages are ABCA8, ABCA6, and KLHDC1. Each is linked with SLC7A1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SLC7A1-to-partner and partner-to-SLC7A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC7A1 versus ABCA8 in BRCA, with a Pearson correlation of -0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC7A1→partner) and Y-score (partner→SLC7A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAABCA8 →-1.035-0.681<.001<.00136
GBMABCA6 →-0.937-0.525.001.00136
BRCAKLHDC1 →-0.709-0.670<.001<.00136
LSCCHGF →-0.764-0.597<.001<.00136
HNSCCD80 →-0.776-0.529.001.00135
GBMCBLN3 →-0.551-0.658<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,284 associations by consensus.

SLC7A1 vs ABCA8 — BRCA

Per-sample scatter of SLC7A1 vs ABCA8 in BRCA (Pearson r = -0.31).

Explore this scatter interactively →

Exploration