SLC7A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC7A1 mutation is significantly associated with the RNA expression of many other genes, with 3,228 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC7A1-associated genes across cancer lineages are RNU6-867P, LINC01895, and MORC1. Each is linked with SLC7A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC7A1-to-partner and partner-to-SLC7A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-867P grouped by SLC7A1-low versus SLC7A1-high in LGG.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC7A1→partner) and Y-score (partner→SLC7A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LGGRNU6-867P →+0.293+7.977<.001.00733
CESCLINC01895 →+0.297+4.567.002.00133
CESCMORC1 →+0.457+4.162<.001.00432
CESCLINC01811 →+0.429+4.779.002.00132
CESCRNU7-173P →+0.301+4.384<.001.00832
CESCRNA5SP423 →+0.234+5.252<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,228 associations by consensus.

RNU6-867P by SLC7A1 expression — LGG

Box plot of RNU6-867P in SLC7A1-low vs SLC7A1-high samples in LGG.

Explore this box plot interactively →

Exploration