SLC6A8

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC6A8 mutation is significantly associated with the total protein of many other genes, with 35 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC6A8-associated genes across cancer lineages are INPP4B, C-Raf, and 14-3-3_beta. Each is linked with SLC6A8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC6A8-to-partner and partner-to-SLC6A8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, INPP4B grouped by SLC6A8-low versus SLC6A8-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A8→partner) and Y-score (partner→SLC6A8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECINPP4B →-0.323-2.115.006.01732
UCECC-Raf →+0.113+1.502.031.03032
UCEC14-3-3_beta →-0.107-2.558.003.01031
UCECeEF2 →+0.290+1.874.027.04931
UCECEGFR_pY1068 →-0.303-2.247<.001.00131
UCECeIF4E →+0.192+3.335.013.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 35 associations by consensus.

INPP4B by SLC6A8 expression — UCEC

Box plot of INPP4B in SLC6A8-low vs SLC6A8-high samples in UCEC.

Explore this box plot interactively →

Exploration