SLC6A7

mutation — cross-omics
Cross-omicsMUTATION → DRUGCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC6A7 mutation is significantly associated with the drug of many other genes, with 20 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC6A7-associated genes across cancer lineages are Niraparib, AZD7969, and PARP_0108. Each is linked with SLC6A7 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC6A7-to-partner and partner-to-SLC6A7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Niraparib grouped by SLC6A7-low versus SLC6A7-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A7→partner) and Y-score (partner→SLC6A7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINENiraparib →+0.470+2.646.007.04731
LARGE_INTESTINEAZD7969 →+0.551+2.649.015.04631
LARGE_INTESTINEPARP_0108 →+0.999+2.710.001.02731
LARGE_INTESTINEPARP_9482 →+1.066+2.710<.001.02731
LARGE_INTESTINE630600 →+0.700+2.649.024.04631
LARGE_INTESTINELMP744 →+0.686+2.649.043.04631
Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

Niraparib by SLC6A7 expression — LARGE_INTESTINE

Box plot of Niraparib in SLC6A7-low vs SLC6A7-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration