SLC6A3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC6A3 mutation is significantly associated with the total protein of many other genes, with 56 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC6A3-associated genes across cancer lineages are Cyclin-B1, ASNS, and 4E-BP1. Each is linked with SLC6A3 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC6A3-to-partner and partner-to-SLC6A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cyclin-B1 grouped by SLC6A3-low versus SLC6A3-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A3→partner) and Y-score (partner→SLC6A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCyclin-B1 →+0.746+3.000.005.03534
UCECASNS →+0.303+1.152.003.04834
UCEC4E-BP1 →+0.234+2.222.002.00934
COADCyclin-E2 →+0.256+2.832.025.03433
SKCMFoxM1 →+0.179+1.662.013.01133
COADSCD →+0.201+3.212.003.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 56 associations by consensus.

Cyclin-B1 by SLC6A3 expression — COAD

Box plot of Cyclin-B1 in SLC6A3-low vs SLC6A3-high samples in COAD.

Explore this box plot interactively →

Exploration