SLC5A12

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC5A12 mutation is significantly associated with the RNA expression of many other genes, with 2,251 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC5A12-associated genes across cancer lineages are OSTCP6, OR10A7, and TAF9. Each is linked with SLC5A12 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC5A12-to-partner and partner-to-SLC5A12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OSTCP6 grouped by SLC5A12-low versus SLC5A12-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC5A12→partner) and Y-score (partner→SLC5A12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCOSTCP6 →+0.183+2.816<.001.00733
LIHCOR10A7 →+0.053+4.758<.001.00633
UCECTAF9 →+0.533+2.928<.001<.00133
UCECDONSON →+0.409+1.934.002.00233
UCECRPP14 →+0.278+1.856.005.00433
UCECH2AZ1 →+0.474+1.748.004.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,251 associations by consensus.

OSTCP6 by SLC5A12 expression — HNSC

Box plot of OSTCP6 in SLC5A12-low vs SLC5A12-high samples in HNSC.

Explore this box plot interactively →

Exploration