SLC52A3

Across TCGA patient cohorts, SLC52A3 protein abundance is significantly associated with the RNA expression of many other genes, with 3,752 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SLC52A3-associated genes across cancer lineages are VSIG4, NOC2LP2, and PLP2. Each is linked with SLC52A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC52A3-to-partner and partner-to-SLC52A3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC52A3 versus VSIG4 in GBM, with a Pearson correlation of 0.90.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC52A3→partner) and Y-score (partner→SLC52A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	VSIG4 →	+2.565	+0.797	.002	.003	3	2
HNSC	NOC2LP2 →	-0.237	-0.745	.004	.001	3	2
HNSC	PLP2 →	-0.870	-0.609	.001	.004	3	1
HNSC	SHCBP1L →	+0.049	+0.612	.006	<.001	3	1
HNSC	PBX3 →	+0.818	+0.506	.006	.009	3	1
HNSC	RNA5SP477 →	-1.673	-0.705	<.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,752 associations by consensus.

SLC52A3 vs VSIG4 — GBM

Explore this scatter interactively →