SLC52A1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC52A1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,069 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC52A1-associated proteins across cancer lineages are FDXR, HSPB1, and UNG_S23. Each is linked with SLC52A1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC52A1-to-partner and partner-to-SLC52A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC52A1 versus FDXR in LSCC, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC52A1→partner) and Y-score (partner→SLC52A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCFDXR →+0.465+0.891<.001<.00134
LSCCHSPB1 →+0.667+0.988.001.00234
LSCCUNG_S23 →+0.822+0.821<.001.00133
HNSCPRODH →+0.580+0.694.001.00333
LSCCPYCR2 →+0.471+0.770.001.00233
LUADPGM3_S64 →-0.378-0.634<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,069 associations by consensus.

SLC52A1 vs FDXR — LSCC

Per-sample scatter of SLC52A1 vs FDXR in LSCC (Pearson r = 0.54).

Explore this scatter interactively →

Exploration