SLC4A4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC4A4 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,473 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC4A4-associated proteins across cancer lineages are SLC4A4_S201, SLC4A4_S245, and SLC4A4_S1025. Each is linked with SLC4A4 in more than 8 cancer types. Because this analysis shows association rather than direction, both SLC4A4-to-partner and partner-to-SLC4A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC4A4 versus SLC4A4_S201 in OV, with a Pearson correlation of 0.55.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC4A4→partner) and Y-score (partner→SLC4A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSLC4A4_S201 →+0.740+0.873<.001<.00139
OVSLC4A4_S245 →+0.740+0.873<.001<.00139
LSCCSLC4A4_S1025 →+1.052+1.491<.001<.00138
LSCCSLC4A4_S1069 →+1.052+1.491<.001<.00138
UCECSLC4A4_S213 →+2.011+1.817<.001<.00138
UCECSLC4A4_S257 →+2.011+1.817<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,473 associations by consensus.

SLC4A4 vs SLC4A4_S201 — OV

Per-sample scatter of SLC4A4 vs SLC4A4_S201 in OV (Pearson r = 0.55).

Explore this scatter interactively →

Exploration