SLC48A1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC48A1 RNA expression is significantly associated with the protein abundance of many other proteins, with 20,476 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC48A1-associated proteins across cancer lineages are FNDC3B, PPIP5K2, and ASCC3. Each is linked with SLC48A1 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLC48A1-to-partner and partner-to-SLC48A1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC48A1→partner) and Y-score (partner→SLC48A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACFNDC3B →-0.419-0.430<.001<.00135
LSCCPPIP5K2 →-0.152-0.544<.001.00434
GBMASCC3 →-0.231-0.699<.001<.00134
BRCARPL5 →-0.196-0.487<.001<.00134
BRCASELENBP1 →+0.492+0.438<.001<.00134
CCRCCCRELD2 →-0.523-0.411.008<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,476 associations by consensus.

Exploration