SLC47A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC47A1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,872 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible SLC47A1-associated genes across cancer lineages are SNORA59B, MAST4, and RANGRF. Each is linked with SLC47A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC47A1-to-partner and partner-to-SLC47A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC47A1 versus SNORA59B in UCEC, with a Pearson correlation of 0.57.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC47A1→partner) and Y-score (partner→SLC47A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNORA59B →+1.640+0.821<.001<.00133
LSCCMAST4 →+1.081+0.640.002.00633
UCECRANGRF →+0.766+1.167<.001<.00132
LSCCLGALSL →+1.648+0.687<.001.00132
CCRCCSLC22A11 →+1.470+0.639<.001<.00132
LUADPTPRH →-1.367-0.594<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,872 associations by consensus.

SLC47A1 vs SNORA59B — UCEC

Per-sample scatter of SLC47A1 vs SNORA59B in UCEC (Pearson r = 0.57).

Explore this scatter interactively →

Exploration