SLC46A1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC46A1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,486 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SLC46A1-associated proteins across cancer lineages are EEF2_S502, GKAP1, and HDGFL3. Each is linked with SLC46A1 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLC46A1-to-partner and partner-to-SLC46A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC46A1 versus EEF2_S502 in HNSC, with a Pearson correlation of -0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC46A1→partner) and Y-score (partner→SLC46A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCEEF2_S502 →-0.925-0.506<.001<.00135
HNSCGKAP1 →+1.148+0.746.001<.00134
HNSCHDGFL3 →+0.604+0.483<.001<.00134
BRCAPPIB →-0.450-0.868<.001<.00134
BRCASPR →+0.456+0.496<.001<.00134
BRCASPR_S103 →+0.538+0.565<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,486 associations by consensus.

SLC46A1 vs EEF2_S502 — HNSC

Per-sample scatter of SLC46A1 vs EEF2_S502 in HNSC (Pearson r = -0.39).

Explore this scatter interactively →

Exploration