SLC43A2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC43A2 mutation is significantly associated with the total protein of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC43A2-associated genes across cancer lineages are GAPDH, Cyclin-B1, and EGFR_pY1068. Each is linked with SLC43A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC43A2-to-partner and partner-to-SLC43A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAPDH grouped by SLC43A2-low versus SLC43A2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC43A2→partner) and Y-score (partner→SLC43A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGAPDH →+0.509+2.000.018.03032
UCECCyclin-B1 →+0.569+3.169.011.01832
UCECEGFR_pY1068 →-0.295-2.321.003.03331
UCECeIF4E →+0.189+3.459.026.00531
UCECERK2 →+0.224+2.459.003.01831
UCECJNK2 →+0.243+3.331.002.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

GAPDH by SLC43A2 expression — UCEC

Box plot of GAPDH in SLC43A2-low vs SLC43A2-high samples in UCEC.

Explore this box plot interactively →

Exploration