SLC41A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC41A1 protein abundance is significantly associated with the RNA expression of many other genes, with 630 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SLC41A1-associated genes across cancer lineages are CSTF1, HIKESHI, and CCL1. Each is linked with SLC41A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC41A1-to-partner and partner-to-SLC41A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC41A1 versus CSTF1 in BRCA, with a Pearson correlation of -0.89.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC41A1→partner) and Y-score (partner→SLC41A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACSTF1 →-1.473-0.953.002.00232
OVHIKESHI →-0.678-0.490.005<.00132
PDACCCL1 →+0.256+0.720<.001.00131
PDACGNG5P2 →-0.394-0.840.004.00131
PDACPART1 →+0.197+0.971.007<.00131
PDACZNF581 →-0.742-0.807.006.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 630 associations by consensus.

SLC41A1 vs CSTF1 — BRCA

Per-sample scatter of SLC41A1 vs CSTF1 in BRCA (Pearson r = -0.89).

Explore this scatter interactively →

Exploration