SLC40A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC40A1 protein abundance is significantly associated with the RNA expression of many other genes, with 6,763 significant associations in total. COAD shows the largest number of these associations.

The most reproducible SLC40A1-associated genes across cancer lineages are TUBA1B, RACGAP1, and PKMYT1. Each is linked with SLC40A1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC40A1-to-partner and partner-to-SLC40A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC40A1 versus TUBA1B in UCEC, with a Pearson correlation of -0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC40A1→partner) and Y-score (partner→SLC40A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTUBA1B →-1.420-0.623.002.00433
OVRACGAP1 →-2.045-1.397<.001<.00133
LSCCPKMYT1 →-1.016-0.485.001.00233
UCECALYREF →-1.146-0.606.003.00433
COADHUWE1 →-1.101-0.449.001.00233
BRCAIGHD2-2 →+3.945+1.070<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,763 associations by consensus.

SLC40A1 vs TUBA1B — UCEC

Per-sample scatter of SLC40A1 vs TUBA1B in UCEC (Pearson r = -0.31).

Explore this scatter interactively →

Exploration