SLC3A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC3A1 mutation is significantly associated with the RNA expression of many other genes, with 4,968 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC3A1-associated genes across cancer lineages are FANCG, POLDIP3, and MRPS15. Each is linked with SLC3A1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLC3A1-to-partner and partner-to-SLC3A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FANCG grouped by SLC3A1-low versus SLC3A1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC3A1→partner) and Y-score (partner→SLC3A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFANCG →+0.659+2.021<.001<.00134
UCECPOLDIP3 →+0.528+2.042<.001<.00134
UCECMRPS15 →+0.388+1.737<.001.00234
UCECABHD3 →+0.664+2.684<.001<.00134
UCECLRRC57 →+0.547+2.321<.001<.00133
UCECBRI3BP →+0.653+2.711<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,968 associations by consensus.

FANCG by SLC3A1 expression — UCEC

Box plot of FANCG in SLC3A1-low vs SLC3A1-high samples in UCEC.

Explore this box plot interactively →

Exploration