SLC3A1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC3A1 mutation is significantly associated with the RNA expression of many other genes, with 25 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SLC3A1-associated genes across cancer lineages are INSL5, SPZ1, and TGIF2LY. Each is linked with SLC3A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC3A1-to-partner and partner-to-SLC3A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, INSL5 grouped by SLC3A1-low versus SLC3A1-high in LUNG_NSCLC_LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC3A1→partner) and Y-score (partner→SLC3A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADINSL5 →+0.087+3.980<.001.00232
OESOPHAGUSSPZ1 →+0.530+4.906<.001.00631
BREASTTGIF2LY →+0.022+5.169<.001.00531
BREASTIFNA2 →+0.032+5.169<.001.00531
SKINC7orf77 →+0.089+5.415<.001.00431
BLOOD_LeukemiaSCGB1D2 →+0.090+3.177.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

INSL5 by SLC3A1 expression — LUNG_NSCLC_LUAD

Box plot of INSL5 in SLC3A1-low vs SLC3A1-high samples in LUNG_NSCLC_LUAD.

Explore this box plot interactively →

Exploration