SLC39A9

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC39A9 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC39A9-associated genes across cancer lineages are DRD3, HSFY2, and OR10W1. Each is linked with SLC39A9 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC39A9-to-partner and partner-to-SLC39A9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DRD3 grouped by SLC39A9-low versus SLC39A9-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC39A9→partner) and Y-score (partner→SLC39A9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEDRD3 →+0.012+4.977<.001.00731
LARGE_INTESTINEHSFY2 →+0.023+4.977<.001.00731
LARGE_INTESTINEOR10W1 →+0.022+4.977<.001.00731
LARGE_INTESTINECD300H →+0.052+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

DRD3 by SLC39A9 expression — LARGE_INTESTINE

Box plot of DRD3 in SLC39A9-low vs SLC39A9-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration