SLC39A4

Across TCGA patient cohorts, SLC39A4 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,480 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SLC39A4-associated proteins across cancer lineages are SCRIB, BOP1, and DCAF13. Each is linked with SLC39A4 in more than 6 cancer types. Because this analysis shows association rather than direction, both SLC39A4-to-partner and partner-to-SLC39A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC39A4 versus SCRIB in HNSC, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC39A4→partner) and Y-score (partner→SLC39A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	SCRIB →	+0.349	+0.732	<.001	<.001	3	7
BRCA	BOP1 →	+0.308	+0.727	<.001	.001	3	6
UCEC	DCAF13 →	+0.311	+0.759	<.001	<.001	3	5
LSCC	HGH1 →	+0.328	+0.952	<.001	<.001	3	5
OV	AGO2 →	+0.250	+0.974	<.001	<.001	3	5
BRCA	CYC1 →	+0.281	+0.570	.005	.006	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,480 associations by consensus.

SLC39A4 vs SCRIB — HNSC

Explore this scatter interactively →