SLC39A12

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC39A12 RNA expression is significantly associated with the go_rna of many other GO terms, with 390 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SLC39A12-associated GO terms across cancer lineages are Regulation of protein polyubiquitination, Cellular response to glucose starvation, and B cell homeostasis. Each is linked with SLC39A12 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC39A12-to-partner and partner-to-SLC39A12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein polyubiquitination grouped by SLC39A12-low versus SLC39A12-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC39A12→partner) and Y-score (partner→SLC39A12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTRegulation of protein polyubiquitination →+0.057+0.044.008.00933
BREASTCellular response to glucose starvation →+0.059+0.042<.001.00733
BLOOD_LeukemiaB cell homeostasis →+0.073+0.040.009.00633
BLOOD_LeukemiaRegulation of leukocyte chemotaxis →+0.048+0.040.008.00633
BLOOD_LeukemiaRegulation of sensory perception of pain →+0.123+0.039<.001.00833
BLOOD_LeukemiaRegulation of sensory perception →+0.123+0.039<.001.00833
Each partner links to its Q-omics profile. Showing the 6 strongest of 390 associations by consensus.

Regulation of protein polyubiquitination by SLC39A12 expression — BREAST

Box plot of Regulation of protein polyubiquitination in SLC39A12-low vs SLC39A12-high samples in BREAST.

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Exploration