SLC39A11

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC39A11 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SLC39A11-associated genes across cancer lineages are ODF4, OTUD6A, and SPANXN2. Each is linked with SLC39A11 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC39A11-to-partner and partner-to-SLC39A11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ODF4 grouped by SLC39A11-low versus SLC39A11-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC39A11→partner) and Y-score (partner→SLC39A11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaODF4 →+0.124+4.867<.001.00931
BLOOD_LymphomaOTUD6A →+0.113+5.209<.001.00531
BLOOD_LymphomaSPANXN2 →+0.199+5.643<.001.00231
BLOOD_LymphomaLYPD4 →+0.128+4.867<.001.00931
SKINKRT24 →+0.331+4.684<.001.00231
SKINGUCA2B →+0.116+4.415<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

ODF4 by SLC39A11 expression — BLOOD_Lymphoma

Box plot of ODF4 in SLC39A11-low vs SLC39A11-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration