SLC38A8

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC38A8 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SLC38A8-associated genes across cancer lineages are CST5, C20orf173, and CD8B. Each is linked with SLC38A8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC38A8-to-partner and partner-to-SLC38A8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CST5 grouped by SLC38A8-low versus SLC38A8-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A8→partner) and Y-score (partner→SLC38A8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSCST5 →+0.113+4.981<.001.00831
LUNG_NSCLC_LUADC20orf173 →+0.030+3.977.004.00531
LUNG_NSCLC_LUADCD8B →+0.333+3.874<.001.00631
LUNG_NSCLC_LUADOR52B4 →+0.011+4.078<.001.00931
LARGE_INTESTINEXKR3 →+0.035+3.793.003.00731
LARGE_INTESTINEOR10Q1 →+0.092+3.920.007.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

CST5 by SLC38A8 expression — CNS

Box plot of CST5 in SLC38A8-low vs SLC38A8-high samples in CNS.

Explore this box plot interactively →

Exploration