SLC38A6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC38A6 protein abundance is significantly associated with the RNA expression of many other genes, with 28 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SLC38A6-associated genes across cancer lineages are RNF167, DGUOK, and SHBG. Each is linked with SLC38A6 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC38A6-to-partner and partner-to-SLC38A6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC38A6 versus RNF167 in LUAD, with a Pearson correlation of -0.88.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A6→partner) and Y-score (partner→SLC38A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRNF167 →-0.680-1.000.002.00731
LUADDGUOK →-0.426-0.997.001.00731
LUADSHBG →-0.325-0.774<.001.00231
LUADMOSPD2 →-0.656-0.775.003.00231
LUADGSTM1 →-2.762-0.612.002.00631
LUADGATD3A →+1.129+0.665.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

SLC38A6 vs RNF167 — LUAD

Per-sample scatter of SLC38A6 vs RNF167 in LUAD (Pearson r = -0.88).

Explore this scatter interactively →

Exploration