SLC38A2

Across TCGA patient cohorts, SLC38A2 mutation is significantly associated with the RNA expression of many other genes, with 2,102 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC38A2-associated genes across cancer lineages are RNU4-79P, MLLT10P2, and LINC01499. Each is linked with SLC38A2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC38A2-to-partner and partner-to-SLC38A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU4-79P grouped by SLC38A2-low versus SLC38A2-high in PRAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A2→partner) and Y-score (partner→SLC38A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PRAD	RNU4-79P →	+0.213	+7.939	<.001	.008	3	3
CESC	MLLT10P2 →	+0.114	+4.669	<.001	.007	3	2
CESC	LINC01499 →	+0.030	+4.812	<.001	.006	3	2
CESC	HNRNPA3P16 →	+0.050	+4.705	<.001	.003	3	2
LIHC	LINC01072 →	+0.139	+5.305	<.001	.003	3	2
UCEC	HAUS1 →	+0.420	+1.684	.007	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,102 associations by consensus.

RNU4-79P by SLC38A2 expression — PRAD

Explore this box plot interactively →