SLC38A11

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC38A11 mutation is significantly associated with the RNA expression of many other genes, with 1,663 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC38A11-associated genes across cancer lineages are CCL5, CCL18, and RNA5SP502. Each is linked with SLC38A11 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC38A11-to-partner and partner-to-SLC38A11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCL5 grouped by SLC38A11-low versus SLC38A11-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC38A11→partner) and Y-score (partner→SLC38A11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCL5 →+1.351+3.108<.001<.00132
UCECCCL18 →+1.306+2.593.003.00632
UCECRNA5SP502 →+0.679+2.534<.001<.00132
UCECALDOA →+0.512+3.087.004<.00132
UCECCD8A →+1.217+4.191<.001<.00132
UCECCXCL13 →+2.186+4.169<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,663 associations by consensus.

CCL5 by SLC38A11 expression — UCEC

Box plot of CCL5 in SLC38A11-low vs SLC38A11-high samples in UCEC.

Explore this box plot interactively →

Exploration